set -x # debug command
#Tmp= "../../../../var/tmp"

if [ -d ../../../../var/tmp/data/filtered-data ]
	then 
		rm -r ../../../../var/tmp/data/filtered-data
fi

if [ -r ../../../../public_html/all.pdf ]
	then 
		rm -r ../../../../public_html/all.pdf
fi

if [ -d ../../../../var/tmp/data/final-stats ]
	then 
		rm -r ../../../../var/tmp/data/final-stats
fi

if [ -d ../../../../var/tmp/data/tex-output ]
	then 
		rm -r ../../../../var/tmp/data/tex-output
fi

if [ -d ../../../../var/tmp/data/test-results ]
	then 
		rm -r ../../../../var/tmp/data/test-results
fi

if [ -d ../../../../var/tmp/data/test-data ]
	then
		rm -r ../../../../var/tmp/data/test-data
fi

if [ -d ../../../../var/tmp ]
	then
		rm -r ../../../../var/tmp
fi
  
if [ ! -d ../../../../var/tmp ]
	then 
		mkdir ../../../../var/tmp
fi



if [ ! -d ../../../../var/tmp/data ]
	then 
		mkdir ../../../../var/tmp/data
fi

if [ ! -d ../../../../var/tmp/data/final-stats ]
	then 
		mkdir ../../../../var/tmp/data/final-stats
fi

if [ ! -d ../../../../var/tmp/data/tex-output ]
    then 
        mkdir ../../../../var/tmp/data/tex-output
fi
if [ ! -d ../../../../var/tmp/data/filtered-data ]
	then 
		mkdir ../../../../var/tmp/data/filtered-data
fi

if [ ! -d ../../../../var/tmp/data/test-data ]
	then 
		mkdir ../../../../var/tmp/data/test-data
fi

if [ ! -d ../../../../var/tmp/data/test-results ]
	then
		mkdir ../../../../var/tmp/data/test-results
fi


cp ../../../trunk/uci/discrete/e2i/hypothyroid.arff ../../../../var/tmp/

cd ../../../trunk/bad

make clean-all
make pdThreshold=0.2 filter-data
cd ../../branches/vamsi/overunder
./j48 >afterprune
#cd ../../branches/vamsi/overunder
#./2.awk ../../../../var/tmp/data/filtered-data/hypothyroid.arff >../../../../var/tmp/a.arff

 
#mv ../../../../var/tmp/a.arff ../../../../var/tmp/hypothyroid.arff

#cd ../../../trunk/bad
#make clean-all
#make pdThreshold=0.2 filter-data
#make resample-data


#make zThresh=-2.326 perform-test
#cd ../../../trunk/bad

#make resample-data
#make class-stats
#make texOutput=stats-table-0.8-0.001.tex \
 #    texStatsLabel="\"Filter PD = 0.8, z-test alpha = 0.001.\""\
  #   texStatsID="\"tab:FinalStats:0.8:0.001\"" tex-output



#make pdThreshold=0.8 filter-data