# Makefile for TAR3 with matlab mex wrapper
#	J. Schumann 8/25/08
# Generalize the build
#	G. Limes 5/4/09


# Select compiler switches for warnings, optimization, and debugging.

WARN		= -Wall -Wextra
OPT		= -O3
DBG		= -g

# Find MEX.

SYSTYPE := $(shell uname)
ifeq ($(SYSTYPE), Linux)
   MEX=/usr/matlab/matlab-r2008b/bin/mex
#  EXT=mex
else
   MEX=/Applications/MATLAB_R2008b/bin/mex
#  EXT=mexmaci
endif
   EXT=$(shell $(MEX)ext)

SRC		= $(TAR3_SOURCEDIR)
INCF		= $(SRC:%=-I%)

MEXFLAGS	= CFLAGS='$$CFLAGS $(WARN) $(OPT) $(DBG)' $(INCF)
CFLAGS		= -fPIC            $(WARN) $(OPT) $(DBG)  $(INCF)

MARGINS_HOME = ..

TAR3_SOURCEDIR=$(MARGINS_HOME)/tar3unix/source/tar3

TAR3_SOURCES= deltaf.c generate.c getdata.c getnames.c process.c random.c rawdata.c sort.c test.c xvalsum.c

TAR3_OBJS= $(TAR3_SOURCES:.c=.o)

all:  $(TAR3_OBJS) callTAR.c
	$(MEX) $(MEXFLAGS) -I$(TAR3_SOURCEDIR) callTAR.c $(TAR3_OBJS) $(TAR3_SOURCEDIR)/memory.c

clean:
	rm -f $(TAR3_OBJS)

%.o: $(TAR3_SOURCEDIR)/%.c
	$(COMPILE.c) $(OUTPUT_OPTION) $<

FORCE: