#!/bin/bash

PATH=$PATH:~/bin

mkdir -p ~/STAR/STAR_results/

declare -a strat
strat[1]="firstreuse";
strat[2]="secondreuse";
strat[3]="thirdreuse";
strat[4]="fourthreuse";

con=1;
for i in `jot 100`;
do
    echo "RUN #" $i
    for st in `jot 4`;
    do
	run="STAR -ex -f ALL -pol all -st ${strat[st]} -run $i";
	echo $run;
	if [ $con -eq 1 ]; then
	    con=0;
	    $run &
	else
	    con=1;
	    $run
	fi
    done
done