This is pdfeTeX, Version 3.141592-1.21a-2.2 (Web2C 7.5.4) (format=pdflatex 2006.2.7) 21 AUG 2006 23:38 entering extended mode **template.tex (./template.tex LaTeX2e <2003/12/01> Babel and hyphenation patterns for american, french, german, ngerman, b ahasa, basque, bulgarian, catalan, croatian, czech, danish, dutch, esperanto, e stonian, finnish, greek, icelandic, irish, italian, latin, magyar, norsk, polis h, portuges, romanian, russian, serbian, slovak, slovene, spanish, swedish, tur kish, ukrainian, nohyphenation, loaded. \@input{Macros/JG_macros.aux} \openout2 = `Macros/JG_macros.aux'. (./Macros/JG_macros.tex) (/sw/share/texmf-dist/tex/latex/base/report.cls Document Class: report 2004/02/16 v1.4f Standard LaTeX document class (/sw/share/texmf-dist/tex/latex/base/size12.clo File: size12.clo 2004/02/16 v1.4f Standard LaTeX file (size option) ) \c@part=\count79 \c@chapter=\count80 \c@section=\count81 \c@subsection=\count82 \c@subsubsection=\count83 \c@paragraph=\count84 \c@subparagraph=\count85 \c@figure=\count86 \c@table=\count87 \abovecaptionskip=\skip41 \belowcaptionskip=\skip42 \bibindent=\dimen102 ) \@input{Macros/packages.aux} \openout2 = `Macros/packages.aux'. (./Macros/packages.tex (/sw/share/texmf-dist/tex/latex/tocbibind/tocbibind.sty Package: tocbibind 2003/03/13 v1.5g extra ToC listings Package tocbibind Note: The document has chapter divisions. Package tocbibind Note: Using chapter style headings, unless overridden. ) (/sw/share/texmf-dist/tex/latex/graphics/graphicx.sty Package: graphicx 1999/02/16 v1.0f Enhanced LaTeX Graphics (DPC,SPQR) (/sw/share/texmf-dist/tex/latex/graphics/keyval.sty Package: keyval 1999/03/16 v1.13 key=value parser (DPC) \KV@toks@=\toks14 ) (/sw/share/texmf-dist/tex/latex/graphics/graphics.sty Package: graphics 2001/07/07 v1.0n Standard LaTeX Graphics (DPC,SPQR) (/sw/share/texmf-dist/tex/latex/graphics/trig.sty Package: trig 1999/03/16 v1.09 sin cos tan (DPC) ) (/sw/share/texmf-dist/tex/latex/graphics/graphics.cfg File: graphics.cfg 2005/02/03 v1.3 graphics configuration of teTeX/TeXLive ) Package graphics Info: Driver file: pdftex.def on input line 80. (/sw/share/texmf-dist/tex/latex/graphics/pdftex.def File: pdftex.def 2002/06/19 v0.03k graphics/color for pdftex \Gread@gobject=\count88 )) \Gin@req@height=\dimen103 \Gin@req@width=\dimen104 ) (/sw/share/texmf-dist/tex/latex/cite/cite.sty LaTeX Info: Redefining \cite on input line 149. LaTeX Info: Redefining \nocite on input line 214. Package: cite 2003/11/04 v 4.01 ) (/sw/share/texmf-dist/tex/latex/url/url.sty \Urlmuskip=\muskip10 Package: url 2004/03/15 ver 3.1 Verb mode for urls, etc. ) (/sw/share/texmf-dist/tex/latex/wrapfig/wrapfig.sty \wrapoverhang=\dimen105 \WF@size=\dimen106 \c@WF@wrappedlines=\count89 \WF@box=\box26 \WF@everypar=\toks15 Package: wrapfig 2003/01/31 v 3.6 ) (/sw/share/texmf-dist/tex/latex/psnfss/times.sty Package: times 2004/09/15 PSNFSS-v9.2 (SPQR) ) (/sw/share/texmf-dist/tex/latex/amsfonts/amssymb.sty Package: amssymb 2002/01/22 v2.2d (/sw/share/texmf-dist/tex/latex/amsfonts/amsfonts.sty Package: amsfonts 2001/10/25 v2.2f \@emptytoks=\toks16 \symAMSa=\mathgroup4 \symAMSb=\mathgroup5 LaTeX Font Info: Overwriting math alphabet `\mathfrak' in version `bold' (Font) U/euf/m/n --> U/euf/b/n on input line 132. )) (/sw/share/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty \fancy@headwidth=\skip43 \f@ncyO@elh=\skip44 \f@ncyO@erh=\skip45 \f@ncyO@olh=\skip46 \f@ncyO@orh=\skip47 \f@ncyO@elf=\skip48 \f@ncyO@erf=\skip49 \f@ncyO@olf=\skip50 \f@ncyO@orf=\skip51 ) (/sw/share/texmf-dist/tex/latex/amsmath/amsmath.sty Package: amsmath 2000/07/18 v2.13 AMS math features \@mathmargin=\skip52 For additional information on amsmath, use the `?' option. (/sw/share/texmf-dist/tex/latex/amsmath/amstext.sty Package: amstext 2000/06/29 v2.01 (/sw/share/texmf-dist/tex/latex/amsmath/amsgen.sty File: amsgen.sty 1999/11/30 v2.0 \@emptytoks=\toks17 \ex@=\dimen107 )) (/sw/share/texmf-dist/tex/latex/amsmath/amsbsy.sty Package: amsbsy 1999/11/29 v1.2d \pmbraise@=\dimen108 ) (/sw/share/texmf-dist/tex/latex/amsmath/amsopn.sty Package: amsopn 1999/12/14 v2.01 operator names ) \inf@bad=\count90 LaTeX Info: Redefining \frac on input line 211. \uproot@=\count91 \leftroot@=\count92 LaTeX Info: Redefining \overline on input line 307. \classnum@=\count93 \DOTSCASE@=\count94 LaTeX Info: Redefining \ldots on input line 379. LaTeX Info: Redefining \dots on input line 382. LaTeX Info: Redefining \cdots on input line 467. \Mathstrutbox@=\box27 \strutbox@=\box28 \big@size=\dimen109 LaTeX Font Info: Redeclaring font encoding OML on input line 567. LaTeX Font Info: Redeclaring font encoding OMS on input line 568. \macc@depth=\count95 \c@MaxMatrixCols=\count96 \dotsspace@=\muskip11 \c@parentequation=\count97 \dspbrk@lvl=\count98 \tag@help=\toks18 \row@=\count99 \column@=\count100 \maxfields@=\count101 \andhelp@=\toks19 \eqnshift@=\dimen110 \alignsep@=\dimen111 \tagshift@=\dimen112 \tagwidth@=\dimen113 \totwidth@=\dimen114 \lineht@=\dimen115 \@envbody=\toks20 \multlinegap=\skip53 \multlinetaggap=\skip54 \mathdisplay@stack=\toks21 LaTeX Info: Redefining \[ on input line 2666. LaTeX Info: Redefining \] on input line 2667. ) (./StyleFiles/suthesis-2e.sty Document Style Option `suthesis' for latex2e <$Date: 11/09/2004 $>. Note that this tries to fulfill the Stanford Thesis requirements but it is unof ficial (/sw/share/texmf-dist/tex/latex/setspace/setspace.sty Package: setspace 2000/12/01 6.7 Contributed and Supported LaTeX2e package Package: `setspace' 6.7 <2000/12/01> )) (./StyleFiles/algorithm2e.sty LaTeX Warning: You have requested package `StyleFiles/algorithm2e', but the package provides `algorithm2e'. Package: algorithm2e 2005/10/04 v3.9 algorithms environments \c@AlgoLine=\count102 (/sw/share/texmf-dist/tex/latex/base/ifthen.sty Package: ifthen 2001/05/26 v1.1c Standard LaTeX ifthen package (DPC) ) (/sw/share/texmf-dist/tex/latex/tools/xspace.sty Package: xspace 1997/10/13 v1.06 Space after command names (DPC) ) ******************************************************** Package `algorithm2e' Release 3.9 -- october 04 2005 -- - algorithm2e-announce@lirmm.fr mailing list for announcement about releases - algorithm2e-discussion@lirmm.fr mailing list for discussion about package subscribe by emailing sympa@lirmm.fr with 'subscribe ' - Author: Christophe Fiorio (fiorio@lirmm.fr) ******************************************************** \skiptotal=\skip55 \skiprule=\skip56 \skiphlne=\skip57 \skiptext=\skip58 \skiplength=\skip59 \algomargin=\skip60 \skipalgocfslide=\skip61 \algowidth=\dimen116 \inoutsize=\dimen117 \inoutline=\dimen118 \algocf@inoutbox=\box29 \algocf@inputbox=\box30 \AlCapSkip=\skip62 \AlCapHSkip=\skip63 \algocf@capbox=\box31 \c@algocfline=\count103 \c@algocf=\count104 \algocf@algoframe=\box32 \algocf@algobox=\box33 ) (/sw/share/texmf-dist/tex/generic/xypic/xy.sty (/sw/share/texmf-dist/tex/generic/xypic/xy.tex Bootstrap'ing: catcodes, docmode, (/sw/share/texmf-dist/tex/generic/xypic/xyrecat.tex) (/sw/share/texmf-dist/tex/generic/xypic/xyidioms.tex) Xy-pic version 3.7 <1999/02/16> Copyright (c) 1991-1998 by Kristoffer H. Rose Xy-pic is free software: see the User's Guide for details. Loading kernel: messages; fonts; allocations: state, \X@c=\dimen119 \Y@c=\dimen120 \U@c=\dimen121 \D@c=\dimen122 \L@c=\dimen123 \R@c=\dimen124 \Edge@c=\toks22 \X@p=\dimen125 \Y@p=\dimen126 \U@p=\dimen127 \D@p=\dimen128 \L@p=\dimen129 \R@p=\dimen130 \Edge@p=\toks23 \X@origin=\dimen131 \Y@origin=\dimen132 \X@xbase=\dimen133 \Y@xbase=\dimen134 \X@ybase=\dimen135 \Y@ybase=\dimen136 \X@min=\dimen137 \Y@min=\dimen138 \X@max=\dimen139 \Y@max=\dimen140 \lastobjectbox@=\box34 \zerodotbox@=\box35 \almostz@=\dimen141 direction, \d@X=\dimen142 \d@Y=\dimen143 \K@=\count105 \KK@=\count106 \Direction=\count107 \K@dXdY=\dimen144 \K@dYdX=\dimen145 \xyread@=\read1 \xywrite@=\write3 \csp@=\count108 \quotPTK@=\dimen146 utility macros; pictures: \xy, positions, \swaptoks@@=\toks24 \connectobjectbox@@=\box36 objects, \styletoks@=\toks25 decorations; kernel objects: directionals, circles, text; options; algorithms: directions, edges, connections; Xy-pic loaded) Package: xy 1999/02/16 Xy-pic version 3.7 (/sw/share/texmf-dist/tex/generic/xypic/xyall.tex Xy-pic option: All features v.3.3 (/sw/share/texmf-dist/tex/generic/xypic/xycurve.tex Xy-pic option: Curve and Spline extension v.3.7 curve, \crv@cnt@=\count109 \crvpts@=\toks26 \splinebox@=\box37 \splineval@=\dimen147 \splinedepth@=\dimen148 \splinetol@=\dimen149 \splinelength@=\dimen150 circles, \L@=\dimen151 loaded) (/sw/share/texmf-dist/tex/generic/xypic/xyframe.tex Xy-pic option: Frame and Bracket extension v.3.7 loaded) (/sw/share/texmf-dist/tex/generic/xypic/xycmtip.tex Xy-pic option: Computer Modern tip extension v.3.3 (/sw/share/texmf-dist/tex/generic/xypic/xytips.tex Xy-pic option: More Tips extension v.3.3 loaded) loaded) (/sw/share/texmf-dist/tex/generic/xypic/xyline.tex Xy-pic option: Line styles extension v.3.6 \xylinethick@=\dimen152 loaded) (/sw/share/texmf-dist/tex/generic/xypic/xyrotate.tex Xy-pic option: Rotate and Scale extension v.3.3 loaded) (/sw/share/texmf-dist/tex/generic/xypic/xycolor.tex Xy-pic option: Colour extension v.3.3 loaded) (/sw/share/texmf-dist/tex/generic/xypic/xymatrix.tex Xy-pic option: Matrix feature v.3.4 \Row=\count110 \Col=\count111 \queue@=\toks27 \queue@@=\toks28 \qcount@=\count112 \qcount@@=\count113 \matrixsize@=\count114 loaded) (/sw/share/texmf-dist/tex/generic/xypic/xyarrow.tex Xy-pic option: Arrow and Path feature v.3.5 path, \ar, loaded) (/sw/share/texmf-dist/tex/generic/xypic/xygraph.tex Xy-pic option: Graph feature v.3.7 loaded) loaded)) Package Fancyhdr Warning: \fancyfoot's `E' option without twoside option is use less on input line 22. Package Fancyhdr Warning: \fancyhead's `E' option without twoside option is use less on input line 24. ) No file template.aux. \openout1 = `template.aux'. LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 9. LaTeX Font Info: ... okay on input line 9. LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 9. LaTeX Font Info: ... okay on input line 9. LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 9. LaTeX Font Info: ... okay on input line 9. LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 9. LaTeX Font Info: ... okay on input line 9. LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 9. LaTeX Font Info: ... okay on input line 9. LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 9. LaTeX Font Info: ... okay on input line 9. LaTeX Font Info: Try loading font information for OT1+ptm on input line 9. (/sw/share/texmf-dist/tex/latex/psnfss/ot1ptm.fd File: ot1ptm.fd 2001/06/04 font definitions for OT1/ptm. ) (/sw/share/texmf-dist/tex/context/base/supp-pdf.tex (/sw/share/texmf-dist/tex/context/base/supp-mis.tex loading : Context Support Macros / Miscellaneous (2004.10.26) \protectiondepth=\count115 \scratchcounter=\count116 \scratchtoks=\toks29 \scratchdimen=\dimen153 \scratchskip=\skip64 \scratchmuskip=\muskip12 \scratchbox=\box38 \scratchread=\read2 \scratchwrite=\write4 \zeropoint=\dimen154 \onepoint=\dimen155 \onebasepoint=\dimen156 \minusone=\count117 \thousandpoint=\dimen157 \onerealpoint=\dimen158 \emptytoks=\toks30 \nextbox=\box39 \nextdepth=\dimen159 \everyline=\toks31 \!!counta=\count118 \!!countb=\count119 \recursecounter=\count120 ) loading : Context Support Macros / PDF (2004.03.26) \nofMPsegments=\count121 \nofMParguments=\count122 \MPscratchCnt=\count123 \MPscratchDim=\dimen160 \MPnumerator=\count124 \everyMPtoPDFconversion=\toks32 ) \openout2 = `ITL/itl.aux'. (./ITL/itl.tex Chapter 1. LaTeX Font Info: Font shape `OT1/ptm/bx/n' in size <12> not available (Font) Font shape `OT1/ptm/b/n' tried instead on input line 1. LaTeX Font Info: Font shape `OT1/ptm/bx/sc' in size <12> not available (Font) Font shape `OT1/ptm/b/sc' tried instead on input line 1. (./ITL/overview.tex LaTeX Warning: Citation `me00e' on page 1 undefined on input line 7. ) (./ITL/details.tex LaTeX Font Info: Try loading font information for OMS+ptm on input line 6. (/sw/share/texmf-dist/tex/latex/psnfss/omsptm.fd File: omsptm.fd ) LaTeX Font Info: Font shape `OMS/ptm/m/n' in size <12> not available (Font) Font shape `OMS/cmsy/m/n' tried instead on input line 6. LaTeX Warning: Reference `sect:ddpDes' on page 1 undefined on input line 6. LaTeX Font Info: Try loading font information for U+msa on input line 12. (/sw/share/texmf-dist/tex/latex/amsfonts/umsa.fd File: umsa.fd 2002/01/19 v2.2g AMS font definitions ) LaTeX Font Info: Try loading font information for U+msb on input line 12. (/sw/share/texmf-dist/tex/latex/amsfonts/umsb.fd File: umsb.fd 2002/01/19 v2.2g AMS font definitions ) [1 {/sw/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] LaTeX Warning: Reference `sect:tar3Details' on page 2 undefined on input line 3 5. LaTeX Warning: Reference `sect:constractSet' on page 2 undefined on input line 38. Package Fancyhdr Warning: \headheight is too small (12.0pt): Make it at least 14.49998pt. We now make it that large for the rest of the document. This may cause the page layout to be inconsistent, however. [2] )) [3] (./template.aux (./ITL/itl.aux)) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) Here is how much of TeX's memory you used: 5639 strings out of 94500 67249 string characters out of 1176115 196605 words of memory out of 1000000 8700 multiletter control sequences out of 10000+50000 16098 words of font info for 47 fonts, out of 500000 for 2000 580 hyphenation exceptions out of 1000 35i,16n,45p,693b,684s stack positions out of 1500i,500n,5000p,200000b,5000s PDF statistics: 37 PDF objects out of 300000 0 named destinations out of 131072 1 words of extra memory for PDF output out of 65536 {/sw/share/texmf-dist/ fonts/enc/dvips/psnfss/8r.enc} Output written on template.pdf (3 pages, 66607 bytes).