#!/bin/bash

#This is example 3. It runs all the methods in COSEEKMO with a total of 158 combined methods (including numeric estimations).

cd ../../

Here=`pwd`
Sandbox=`$Here/bin/playpen coseekmo`
Repeats=20
Use=10
Pred=30
Trust=95
SpecialMethods="cocomost cocomin1 cocomin2"
NormalMethods="lc m5p lsr nearestNeighborMe nearestNeighborMre staticLocomo dynamicLocomoMean dynamicLocomoMedian"
ColumnPrunerMethods="oldCocominWrapper newCocominWrapperNative newCocominWrapperMedian lsrWrapper lsrWrapperNoLog m5pWrapper m5pWrapperNoLog"

Log=$Here/results/mainLog

trap "/bin/rm -rf $Sandbox" 0 1 2 3 15

cp bin/* $Sandbox
cp cocomin/* $Sandbox
cp cocomost/* $Sandbox
cp config/* $Sandbox
mkdir $Sandbox/data
cp data/* $Sandbox/data/
cp evaluation/* $Sandbox
cp lc/* $Sandbox
cp localwrapper/* $Sandbox
cp locomo/* $Sandbox
cp methods/* $Sandbox
cp nearest/* $Sandbox
cp weka/* $Sandbox
cp eg/3/generate3 $Sandbox

cd $Sandbox

g++ -Wall cocomostFSS.cpp -o cocomostFSS
g++ -Wall fastCocomin.cpp -o fastCocomin
g++ -Wall cocomin81.cpp -o cocomin81

gawk -f coc81.awk data/coc81modetypelangtype.csv
gawk -f nasa93.awk data/nasa93.csv

#Run the experiment and generate the results
./generate3 $Here $Sandbox $Repeats $Use $Pred "$SpecialMethods" "$NormalMethods" "$ColumnPrunerMethods" $Log

#Run the non-parametric analysis using the mwu test (Possible evaluation criteria are AR, MRE, MER, BRE, IBRE)
./mwu $Here $Log AR